Transcript: ENSGALT00010068104.1 NOTCH1-202

Description

notch 1 [Source:NCBI gene (formerly Entrezgene);Acc:395655]

Location

About this transcript

This transcript has 33 exons, is annotated with 393 domains and features, is associated with 1671 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010068104.1	NOTCH1-202	9396	2561aa	ENSGALP00010041847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AHH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010068107.1	NOTCH1-201	8539	2551aa	ENSGALP00010041850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2ULK6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 9,396 bps, Translation length: 2,561 residues

Version

ENSGALT00010068104.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.