Transcript: ENSGALT00010032829.1 CDX1-201

Description

caudal type homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:395397]

Gene Synonyms

CDX-A, CDXA, CHOX-CAD1, CHox-cad

Location

About this transcript

This transcript has 3 exons, is annotated with 20 domains and features, is associated with 745 variant alleles and maps to 13 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010032829.1	CDX1-201	2430	260aa	ENSGALP00010019442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,430 bps, Translation length: 260 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9DEB6

Version

ENSGALT00010032829.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.