Transcript: ENSGALT00010057197.1 PTPN6-201

Description

protein tyrosine phosphatase non-receptor type 6 [Source:NCBI gene (formerly Entrezgene);Acc:427947]

Location

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 922 variant alleles and maps to 14 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010057197.1	PTPN6-201	2787	606aa	ENSGALP00010034788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UCN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010057186.1	PTPN6-202	3250	604aa	ENSGALP00010034779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N843	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Protein summary