Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ERN1 ENSGALG00010029610

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Description

endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene (formerly Entrezgene);Acc:417414]

Location

Primary_assembly 18: 7,388,239-7,422,209 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028499.1

About this gene

This gene has 5 transcripts (splice variants), 134 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010071596.1	ERN1-202	4468	963aa	ENSGALP00010044286.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AE45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010071597.1	ERN1-201	4811	918aa	ENSGALP00010044287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1APH2	-
ENSGALT00010071598.1	ERN1-203	4585	947aa	ENSGALP00010044288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AJH7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010071593.1	ERN1-204	3144	917aa	ENSGALP00010044283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AJH4	-
ENSGALT00010071594.1	ERN1-205	688	172aa	ENSGALP00010044284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AMZ4	-

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Summary

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