Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP1 ENSGALG00010029604

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Description

caspase 1 [Source:UniProtKB Gene Name;Acc:A0A8V1AMX9]

Location

Primary_assembly 19: 1,181,793-1,186,977 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028500.1

About this gene

This gene has 4 transcripts (splice variants), 250 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010071575.1	CASP1-202	1652	393aa	ENSGALP00010044265.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AL60	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010071576.1	CASP1-203	1922	256aa	ENSGALP00010044266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P7C1	-
ENSGALT00010071577.1	CASP1-201	1649	385aa	ENSGALP00010044267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1APF7	-
ENSGALT00010071574.1	CASP1-204	1640	355aa	ENSGALP00010044264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AMX9	-

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Summary

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