Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCA2 ENSGALG00010028002

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Description

ATP binding cassette subfamily A member 2 [Source:UniProtKB Gene Name;Acc:A0A8V1AEF8]

Location

Primary_assembly 17: 1,094,107-1,127,333 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028498.1

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010067878.1	ABCA2-204	10032	2509aa	ENSGALP00010041621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AEF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010067880.1	ABCA2-205	10073	2508aa	ENSGALP00010041623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AIS4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010067874.1	ABCA2-202	9927	2439aa	ENSGALP00010041617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1A6R9	-
ENSGALT00010067877.1	ABCA2-203	9821	2446aa	ENSGALP00010041620.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1AGY4	-
ENSGALT00010067871.1	ABCA2-201	9486	2304aa	ENSGALP00010041614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V1ABL0	-

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Summary

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