Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TPM1 ENSGALG00010024570

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Description

tropomyosin 1 [Source:NCBI gene (formerly Entrezgene);Acc:396366]

Gene Synonyms

alpha-fTM, tropomyosin-1

Location

Primary_assembly 10: 4,182,078-4,207,858 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028491.1

About this gene

This gene has 8 transcripts (splice variants), 54 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010059943.1	TPM1-205	3305	281aa	ENSGALP00010036703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010059936.1	TPM1-204	2996	245aa	ENSGALP00010036696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010059938.1	TPM1-206	2852	281aa	ENSGALP00010036698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010059947.1	TPM1-202	2161	284aa	ENSGALP00010036707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010059941.1	TPM1-203	2034	326aa	ENSGALP00010036701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010059948.1	TPM1-201	1337	268aa	ENSGALP00010036708.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010059934.1	TPM1-207	1278	284aa	ENSGALP00010036694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AWI4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010059931.1	TPM1-208	1030	278aa	ENSGALP00010036691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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