Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRDM10 ENSGALG00010023248

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Description

PR/SET domain 10 [Source:HGNC Symbol;Acc:HGNC:13995]

Location

Primary_assembly 24: 1,553,943-1,591,172 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028505.1

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010056690.1	PRDM10-203	4973	1203aa	ENSGALP00010034432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010056694.1	PRDM10-204	4853	1163aa	ENSGALP00010034436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010056684.1	PRDM10-201	4770	1189aa	ENSGALP00010034426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010056687.1	PRDM10-202	3963	1153aa	ENSGALP00010034429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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