Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CTCF ENSGALG00010022627

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Description

CCCTC-binding factor [Source:NCBI gene (formerly Entrezgene);Acc:396274]

Gene Synonyms

CTCFL

Location

Primary_assembly 11: 1,128,888-1,159,385 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028492.1

About this gene

This gene has 6 transcripts (splice variants), 264 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010055081.1	CTCF-201	4253	728aa	ENSGALP00010033306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NFT1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010055059.1	CTCF-206	4008	806aa	ENSGALP00010033292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010055070.1	CTCF-203	3981	739aa	ENSGALP00010033298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PYS0	-
ENSGALT00010055075.1	CTCF-204	3839	743aa	ENSGALP00010033302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010055064.1	CTCF-205	3727	742aa	ENSGALP00010033295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010055078.1	CTCF-202	3622	685aa	ENSGALP00010033304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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