Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABLIM1 ENSGALG00010022454

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Description

actin binding LIM protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:423911]

Location

Primary_assembly 6: 28,610,015-28,780,672 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 6 transcripts (splice variants), 279 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010054601.1	ABLIM1-202	5068	774aa	ENSGALP00010032985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010054615.1	ABLIM1-203	4948	734aa	ENSGALP00010032994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010054626.1	ABLIM1-205	4911	660aa	ENSGALP00010032999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010054617.1	ABLIM1-204	4801	685aa	ENSGALP00010032996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010054636.1	ABLIM1-201	4754	694aa	ENSGALP00010033004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010054629.1	ABLIM1-206	2623	705aa	ENSGALP00010033001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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