Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: AP3M1 ENSGALG00010022452

.

Description

adaptor related protein complex 3 mu 1 subunit [Source:NCBI gene (formerly Entrezgene);Acc:423736]

Location

Primary_assembly 6: 16,152,594-16,169,076 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010054594.1	AP3M1-204	1852	464aa	ENSGALP00010032979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZNE7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010054585.1	AP3M1-206	2384	424aa	ENSGALP00010032972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZI11	-
ENSGALT00010054600.1	AP3M1-201	2353	387aa	ENSGALP00010032984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZNF2	-
ENSGALT00010054613.1	AP3M1-202	2322	420aa	ENSGALP00010032993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZVV6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010054608.1	AP3M1-203	2230	415aa	ENSGALP00010032990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZQT6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010054589.1	AP3M1-205	1755	436aa	ENSGALP00010032975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZQR8	-

.

Summary

.

.