Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PDGFA ENSGALG00010022164

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Description

platelet derived growth factor subunit A [Source:NCBI gene (formerly Entrezgene);Acc:374196]

Gene Synonyms

PDGF-A

Location

Primary_assembly 14: 1,986,675-2,020,495 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028495.1

About this gene

This gene has 6 transcripts (splice variants), 263 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010053942.1	PDGFA-201	2265	237aa	ENSGALP00010032489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZUG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010053932.1	PDGFA-203	2731	196aa	ENSGALP00010032480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2TU24	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010053916.1	PDGFA-206	2501	206aa	ENSGALP00010032468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZGM7	-
ENSGALT00010053929.1	PDGFA-205	1422	211aa	ENSGALP00010032478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90WK2	-
ENSGALT00010053938.1	PDGFA-202	1412	226aa	ENSGALP00010032486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZP81	-
ENSGALT00010053922.1	PDGFA-204	1335	194aa	ENSGALP00010032473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90WK1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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