Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGA6 ENSGALG00010021931

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Description

integrin subunit alpha 6 [Source:NCBI gene (formerly Entrezgene);Acc:396226]

Location

Primary_assembly 7: 17,336,778-17,455,788 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028488.1

About this gene

This gene has 6 transcripts (splice variants), 364 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010053373.1	ITGA6-201	4975	1008aa	ENSGALP00010032173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010053343.1	ITGA6-204	4203	1128aa	ENSGALP00010032149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010053394.1	ITGA6-203	4193	1036aa	ENSGALP00010032186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010053354.1	ITGA6-205	4071	1084aa	ENSGALP00010032158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010053385.1	ITGA6-202	4069	1053aa	ENSGALP00010032180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010053327.1	ITGA6-206	3534	1072aa	ENSGALP00010032139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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