Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL12 ENSGALG00010021867

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Description

C-X-C motif chemokine ligand 12 [Source:NCBI gene (formerly Entrezgene);Acc:395180]

Gene Synonyms

SDF1

Location

Primary_assembly 6: 19,780,250-19,797,424 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 4 transcripts (splice variants) and 268 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010053191.1	CXCL12-203	1657	167aa	ENSGALP00010032050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZMY6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010053197.1	CXCL12-201	4355	131aa	ENSGALP00010032055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6T7B9	-
ENSGALT00010053203.1	CXCL12-202	4297	93aa	ENSGALP00010032059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZMM6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010053189.1	CXCL12-204	2472	89aa	ENSGALP00010032049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZKX2	-

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Summary

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