Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARNTL ENSGALG00010021726

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Description

aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene (formerly Entrezgene);Acc:374115]

Gene Synonyms

BMAL1

Location

Primary_assembly 5: 7,233,334-7,278,525 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028486.1

About this gene

This gene has 6 transcripts (splice variants), 241 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010052800.1	ARNTL-201	3139	687aa	ENSGALP00010031706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010052821.1	ARNTL-202	2721	620aa	ENSGALP00010031727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010052808.1	ARNTL-204	2695	633aa	ENSGALP00010031714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9I8T7	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSGALT00010052815.1	ARNTL-203	2642	601aa	ENSGALP00010031721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010052818.1	ARNTL-206	2575	632aa	ENSGALP00010031724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010052795.1	ARNTL-205	2539	577aa	ENSGALP00010031701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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