Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNTNAP5 ENSGALG00010021708

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Description

contactin associated protein 5 [Source:NCBI gene (formerly Entrezgene);Acc:424231]

Gene Synonyms

CASPR5

Location

Primary_assembly 7: 24,033,391-24,296,513 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028488.1

About this gene

This gene has 3 transcripts (splice variants), 251 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010052757.1	CNTNAP5-202	5171	1302aa	ENSGALP00010031663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZLH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010052760.1	CNTNAP5-201	4943	1226aa	ENSGALP00010031666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZJV3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010052752.1	CNTNAP5-203	4609	1299aa	ENSGALP00010031658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZLH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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