Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SEMA7A ENSGALG00010021187

.

Description

semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene (formerly Entrezgene);Acc:415298]

Location

Primary_assembly 10: 2,552,244-2,582,142 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028491.1

About this gene

This gene has 4 transcripts (splice variants), 276 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010051352.1	SEMA7A-201	3842	740aa	ENSGALP00010030543.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010051346.1	SEMA7A-203	3515	631aa	ENSGALP00010030537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010051349.1	SEMA7A-202	3412	636aa	ENSGALP00010030540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1NIZ9	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010051341.1	SEMA7A-204	2785	370aa	ENSGALP00010030532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.