Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX2 ENSGALG00010021060

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Description

paired box 2 [Source:NCBI gene (formerly Entrezgene);Acc:395574]

Gene Synonyms

PAX-2

Location

Primary_assembly 6: 17,860,442-17,952,375 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 9 transcripts (splice variants), 253 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010050963.1	PAX2-204	2527	537aa	ENSGALP00010030154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZH56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010050960.1	PAX2-201	4589	385aa	ENSGALP00010030151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZN87	-
ENSGALT00010050967.1	PAX2-202	2622	473aa	ENSGALP00010030158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZH80	-
ENSGALT00010050979.1	PAX2-205	2413	463aa	ENSGALP00010030170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZA57	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010050982.1	PAX2-203	2370	495aa	ENSGALP00010030173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZH94	-
ENSGALT00010050970.1	PAX2-206	2340	537aa	ENSGALP00010030161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZN96	-
ENSGALT00010050975.1	PAX2-208	2076	448aa	ENSGALP00010030166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZNA0	-
ENSGALT00010050973.1	PAX2-207	2048	436aa	ENSGALP00010030164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZH67	-
ENSGALT00010050955.1	PAX2-209	1679	171aa	ENSGALP00010030146.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0ZN82	-

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Summary

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