Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLCH2 ENSGALG00010019834

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Description

phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]

Location

Primary_assembly 21: 1,462,587-1,544,865 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028502.1

About this gene

This gene has 8 transcripts (splice variants), 254 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010048327.1	PLCH2-207	7185	1606aa	ENSGALP00010028495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010048338.1	PLCH2-208	7173	1602aa	ENSGALP00010028501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010048319.1	PLCH2-206	6640	1549aa	ENSGALP00010028490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010048309.1	PLCH2-205	4769	1249aa	ENSGALP00010028484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010048286.1	PLCH2-204	4131	1376aa	ENSGALP00010028471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010048234.1	PLCH2-201	3252	1083aa	ENSGALP00010028442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010048267.1	PLCH2-203	3252	1083aa	ENSGALP00010028459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010048255.1	PLCH2-202	3213	1070aa	ENSGALP00010028453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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