Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SOCS1 ENSGALG00010019269

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Description

suppressor of cytokine signaling 1 [Source:NCBI gene (formerly Entrezgene);Acc:416630]

Location

Primary_assembly 14: 8,952,641-8,955,779 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028495.1

About this gene

This gene has 3 transcripts (splice variants), 171 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010046593.1	SOCS1-202	2203	207aa	ENSGALP00010027751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6RCQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010046596.1	SOCS1-201	1600	207aa	ENSGALP00010027754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6RCQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010046591.1	SOCS1-203	1085	207aa	ENSGALP00010027749.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6RCQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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