Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ACTR1A ENSGALG00010018561

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Description

ARP1 actin-related A, centractin alpha [Source:NCBI gene (formerly Entrezgene);Acc:423862]

Location

Primary_assembly 6: 23,952,961-23,969,142 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028487.1

About this gene

This gene has 4 transcripts (splice variants), 217 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010044923.1	ACTR1A-202	3357	378aa	ENSGALP00010026830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z7A0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010044935.1	ACTR1A-204	3255	376aa	ENSGALP00010026838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5ZM58	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010044915.1	ACTR1A-203	3142	370aa	ENSGALP00010026825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z794	-
ENSGALT00010044948.1	ACTR1A-201	2064	352aa	ENSGALP00010026846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Z0U4	-

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Summary

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