Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CD40LG ENSGALG00010016205

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Description

CD40 ligand [Source:NCBI gene (formerly Entrezgene);Acc:395485]

Gene Synonyms

CD154, CD40L, TNFSF5

Location

Primary_assembly 4: 4,319,351-4,327,619 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028485.1

About this gene

This gene has 3 transcripts (splice variants), 124 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010038948.1	CD40LG-201	1310	379aa	ENSGALP00010022502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0YUS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010038939.1	CD40LG-203	2033	270aa	ENSGALP00010022499.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0YV54	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010038929.1	CD40LG-202	1002	303aa	ENSGALP00010022495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0YNB9	-

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Summary

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