Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG4A ENSGALG00010015782

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Description

autophagy related 4A cysteine peptidase [Source:NCBI gene (formerly Entrezgene);Acc:772074]

Gene Synonyms

APG4A

Location

Primary_assembly 4: 14,060,674-14,072,936 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028485.1

About this gene

This gene has 5 transcripts (splice variants), 162 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010037992.1	ATG4A-201	2634	384aa	ENSGALP00010021918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010038003.1	ATG4A-203	2593	397aa	ENSGALP00010021926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I7Q405	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010037995.1	ATG4A-202	2532	350aa	ENSGALP00010021920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010037999.1	ATG4A-205	2380	360aa	ENSGALP00010021923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010037998.1	ATG4A-204	2333	364aa	ENSGALP00010021922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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