Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CDX1 ENSGALG00010013660

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Description

caudal type homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:395397]

Gene Synonyms

CDX-A, CDXA, CHOX-CAD1, CHox-cad

Location

Primary_assembly 13: 12,835,829-12,846,155 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028494.1

About this gene

This gene has 1 transcript (splice variant), 177 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010032829.1	CDX1-201	2430	260aa	ENSGALP00010019442.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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