calpastatin [Source:NCBI gene (formerly Entrezgene);Acc:427121]
Primary_assembly Z: 57,832,712-57,894,033 reverse strand.
bGalGal1.mat.broiler.GRCg7b:CM028522.1
This gene has 10 transcripts (splice variants) and 206 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | Flags |
|---|---|---|---|---|---|---|
| ENSGALT00010029298.1 | CAST-209 | 3862 | 771aa | ENSGALP00010017012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSGALT00010029254.1 | CAST-206 | 3692 | 769aa | ENSGALP00010016973.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010029289.1 | CAST-204 | 3624 | 745aa | ENSGALP00010017004.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010029282.1 | CAST-207 | 3604 | 740aa | ENSGALP00010016997.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| ENSGALT00010029246.1 | CAST-203 | 3602 | 768aa | ENSGALP00010016967.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010029271.1 | CAST-205 | 3594 | 750aa | ENSGALP00010016990.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010029230.1 | CAST-201 | 3570 | 723aa | ENSGALP00010016955.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSGALT00010029240.1 | CAST-202 | 3539 | 747aa | ENSGALP00010016963.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| ENSGALT00010029260.1 | CAST-208 | 3521 | 734aa | ENSGALP00010016978.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - |
| ENSGALT00010029226.1 | CAST-210 | 3486 | 697aa | ENSGALP00010016951.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
