Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRD ENSGALG00010012063

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Description

protein tyrosine phosphatase receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]

Location

Primary_assembly Z: 29,202,134-29,561,525 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028522.1

About this gene

This gene has 6 transcripts (splice variants), 270 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010028896.1	PTPRD-203	7948	1911aa	ENSGALP00010016654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010028899.1	PTPRD-204	7936	1907aa	ENSGALP00010016658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010028904.1	PTPRD-205	7639	1808aa	ENSGALP00010016663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010028907.1	PTPRD-206	6742	1509aa	ENSGALP00010016666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010028888.1	PTPRD-201	1326	216aa	ENSGALP00010016647.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010028890.1	PTPRD-202	1091	209aa	ENSGALP00010016649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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