Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLCO1A2 ENSGALG00010011668

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Description

solute carrier organic anion transporter family member 1A2 [Source:HGNC Symbol;Acc:HGNC:10956]

Location

Primary_assembly 1: 65,289,193-65,340,175 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 4 transcripts (splice variants), 158 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010027920.1	SLCO1A2-204	2722	671aa	ENSGALP00010016020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010027915.1	SLCO1A2-201	3063	652aa	ENSGALP00010016016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010027916.1	SLCO1A2-202	2798	654aa	ENSGALP00010016017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010027917.1	SLCO1A2-203	2699	621aa	ENSGALP00010016018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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