Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COLGALT1 ENSGALG00010011588

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Description

collagen beta(1-O)galactosyltransferase 1 [Source:UniProtKB Gene Name;Acc:A0A8V0Y5H9]

Location

Primary_assembly 8: 7,729,594-7,765,009 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028489.1

About this gene

This gene has 2 transcripts (splice variants), 245 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010027725.1	COLGALT1-201	3400	710aa	ENSGALP00010015891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y5H9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010027728.1	COLGALT1-202	3060	567aa	ENSGALP00010015893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0YBP7	-

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Summary

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