homeobox containing 1 [Source:NCBI gene (formerly Entrezgene);Acc:422024]
Primary_assembly 3: 105,896,159-106,006,850 forward strand.
bGalGal1.mat.broiler.GRCg7b:CM028484.1
This gene has 10 transcripts (splice variants) and 278 orthologues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSGALT00010026427.1 | HMBOX1-205 | 4903 | 406aa | ENSGALP00010015039.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026416.1 | HMBOX1-210 | 3786 | 421aa | ENSGALP00010015030.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026436.1 | HMBOX1-202 | 3462 | 424aa | ENSGALP00010015048.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026429.1 | HMBOX1-204 | 3409 | 412aa | ENSGALP00010015041.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026422.1 | HMBOX1-207 | 3368 | 432aa | ENSGALP00010015035.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026417.1 | HMBOX1-209 | 3287 | 434aa | ENSGALP00010015031.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026433.1 | HMBOX1-203 | 3260 | 419aa | ENSGALP00010015045.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSGALT00010026430.1 | HMBOX1-201 | 3249 | 418aa | ENSGALP00010015042.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026419.1 | HMBOX1-208 | 3236 | 465aa | ENSGALP00010015033.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - |
| ENSGALT00010026425.1 | HMBOX1-206 | 3177 | 454aa | ENSGALP00010015037.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E1BZ53 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
