Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AFAP1 ENSGALG00010009608

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Description

actin filament associated protein 1 [Source:NCBI gene (formerly Entrezgene);Acc:374034]

Gene Synonyms

AFAP

Location

Primary_assembly 4: 80,055,727-80,166,479 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028485.1

About this gene

This gene has 7 transcripts (splice variants), 198 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010022914.1	AFAP1-205	3317	831aa	ENSGALP00010013243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y4F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010022963.1	AFAP1-203	5976	815aa	ENSGALP00010013274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1C282	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010022960.1	AFAP1-202	5910	765aa	ENSGALP00010013271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y2T7	-
ENSGALT00010022926.1	AFAP1-201	5659	731aa	ENSGALP00010013250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y2R5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010022955.1	AFAP1-204	3350	745aa	ENSGALP00010013269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y4I3	-
ENSGALT00010022949.1	AFAP1-206	2408	742aa	ENSGALP00010013266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y2T3	-
ENSGALT00010022942.1	AFAP1-207	2332	738aa	ENSGALP00010013261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y2S6	-

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Summary

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