Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MEF2C ENSGALG00010007430

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Description

myocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996]

Location

Primary_assembly Z: 61,121,780-61,256,942 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028522.1

About this gene

This gene has 5 transcripts (splice variants), 271 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010017711.1	MEF2C-203	3005	473aa	ENSGALP00010009791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010017717.1	MEF2C-202	4036	433aa	ENSGALP00010009793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P4J1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010017714.1	MEF2C-204	2975	463aa	ENSGALP00010009792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PNH4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010017706.1	MEF2C-205	2907	441aa	ENSGALP00010009787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2U3E0	-
ENSGALT00010017710.1	MEF2C-201	2054	451aa	ENSGALP00010009790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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