Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZCCHC9 ENSGALG00010007097

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Description

zinc finger CCHC-type containing 9 [Source:HGNC Symbol;Acc:HGNC:25424]

Location

Primary_assembly Z: 64,458,381-64,465,572 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028522.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010016851.1	ZCCHC9-203	1855	254aa	ENSGALP00010009467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010016855.1	ZCCHC9-201	2274	212aa	ENSGALP00010009469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UGS3	-
ENSGALT00010016853.1	ZCCHC9-202	2248	235aa	ENSGALP00010009468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BZR6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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