Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSGALG00010007011

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Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:395724]

Gene Synonyms

HMG-1, HMG1

Location

Primary_assembly 1: 174,950,793-175,004,160 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 3 transcripts (splice variants), 575 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010016643.1	HMGB1-203	2780	215aa	ENSGALP00010009408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9YH06	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010016654.1	HMGB1-201	2664	249aa	ENSGALP00010009411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010016656.1	HMGB1-202	2561	241aa	ENSGALP00010009413.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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