Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DCLK1 ENSGALG00010006472

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Description

doublecortin like kinase 1 [Source:NCBI gene (formerly Entrezgene);Acc:418903]

Location

Primary_assembly 1: 172,583,346-172,817,719 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 6 transcripts (splice variants), 292 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010015417.1	DCLK1-204	4293	740aa	ENSGALP00010009007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2U592	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010015423.1	DCLK1-202	7364	729aa	ENSGALP00010009009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P0Z1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010015400.1	DCLK1-206	3049	422aa	ENSGALP00010009001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UB82	-
ENSGALT00010015409.1	DCLK1-205	2729	363aa	ENSGALP00010009003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2TXW7	-
ENSGALT00010015413.1	DCLK1-203	2686	715aa	ENSGALP00010009005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010015406.1	DCLK1-201	1482	358aa	ENSGALP00010009002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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