Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HPGDS ENSGALG00010005518

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Description

hematopoietic prostaglandin D synthase [Source:NCBI gene (formerly Entrezgene);Acc:395863]

Gene Synonyms

H-PGDS, PGDS

Location

Primary_assembly 4: 36,743,634-36,772,199 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028485.1

About this gene

This gene has 3 transcripts (splice variants), 133 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010013199.1	HPGDS-201	4067	217aa	ENSGALP00010007761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010013205.1	HPGDS-202	4034	199aa	ENSGALP00010007767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O73888	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010013202.1	HPGDS-203	993	198aa	ENSGALP00010007764.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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