Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PIP4K2A ENSGALG00010004265

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Description

phosphatidylinositol-5-phosphate 4-kinase type 2 alpha [Source:NCBI gene (formerly Entrezgene);Acc:420504]

Gene Synonyms

PIP5K2A

Location

Primary_assembly 2: 17,453,758-17,554,445 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028483.1

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSGALT00010009987.1	PIP4K2A-204	3497	425aa	ENSGALP00010005846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010009990.1	PIP4K2A-202	3449	395aa	ENSGALP00010005848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010009988.1	PIP4K2A-203	2445	365aa	ENSGALP00010005847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010009983.1	PIP4K2A-205	2392	374aa	ENSGALP00010005844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSGALT00010009985.1	PIP4K2A-201	1815	392aa	ENSGALP00010005845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Summary

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