Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCB1 ENSGALG00010004200

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Description

ATP binding cassette subfamily B member 1 [Source:NCBI gene (formerly Entrezgene);Acc:395712]

Gene Synonyms

ABCB1LB, ABCB4, CMDR1

Location

Primary_assembly 2: 20,620,324-20,661,077 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028483.1

About this gene

This gene has 3 transcripts (splice variants), 186 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010009806.1	ABCB1-203	4345	1374aa	ENSGALP00010005724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XLR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010009802.1	ABCB1-201	4984	1311aa	ENSGALP00010005722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XNC7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010009796.1	ABCB1-202	3723	1220aa	ENSGALP00010005720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XG86	-

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Summary

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