Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASP6 ENSGALG00010003879

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Description

caspase 6 [Source:NCBI gene (formerly Entrezgene);Acc:395477]

Gene Synonyms

CASP-6, caspase-6

Location

Primary_assembly 4: 57,664,200-57,673,424 forward strand.

bGalGal1.mat.broiler.GRCg7b:CM028485.1

About this gene

This gene has 5 transcripts (splice variants), 275 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010008999.1	CASP6-201	2591	381aa	ENSGALP00010005314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XM56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGALT00010008986.1	CASP6-204	2373	350aa	ENSGALP00010005302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XF28	-
ENSGALT00010008991.1	CASP6-203	2151	290aa	ENSGALP00010005306.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XKK1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSGALT00010008983.1	CASP6-205	2104	285aa	ENSGALP00010005299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XM38	-
ENSGALT00010008995.1	CASP6-202	2057	255aa	ENSGALP00010005310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XHU9	-

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Summary

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