Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PCK2 ENSGALG00010003862

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Description

phosphoenolpyruvate carboxykinase 2, mitochondrial [Source:NCBI gene (formerly Entrezgene);Acc:396457]

Gene Synonyms

PEPCK-M

Location

Primary_assembly 35: 287,074-313,885 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028516.1

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010008953.1	PCK2-204	3733	657aa	ENSGALP00010005285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XKI3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010008944.1	PCK2-205	3676	635aa	ENSGALP00010005276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XAX8	-
ENSGALT00010008948.1	PCK2-201	3642	634aa	ENSGALP00010005280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XKH8	-
ENSGALT00010008952.1	PCK2-203	3632	626aa	ENSGALP00010005284.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XHS6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010008950.1	PCK2-202	3580	617aa	ENSGALP00010005282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0XAY3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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