Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PTP4A1 ENSGALG00010001496

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Description

protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene (formerly Entrezgene);Acc:421877]

Location

Primary_assembly 3: 85,323,624-85,338,611 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028484.1

About this gene

This gene has 1 transcript (splice variant), 270 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010003457.1	PTP4A1-201	2729	173aa	ENSGALP00010001900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5ZIQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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