Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: synj1 ENSGACG00000020575

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Description

synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]

Location

Primary_assembly VII: 23,119,619-23,140,490 forward strand.

GAculeatus_UGA_version5:CM029288.1

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000050551.1	synj1-201	5083	1627aa	ENSGACP00000054888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4QWL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000027258.2	synj1-202	5068	1622aa	ENSGACP00000027206.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3QBE0	-
ENSGACT00000034036.1	synj1-203	5059	1619aa	ENSGACP00000041263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PSL5	-
ENSGACT00000072250.1	synj1-204	4978	1592aa	ENSGACP00000037663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PGN8	-
ENSGACT00000027259.2	synj1-205	4877	1514aa	ENSGACP00000027207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3QBE1	-

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Summary

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