Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sox6 ENSGACG00000015635

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Description

SRY-box transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]

Location

Primary_assembly II: 9,902,200-10,017,225 forward strand.

GAculeatus_UGA_version5:CM029283.1

About this gene

This gene has 8 transcripts (splice variants), 212 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000035097.1	sox6-208	3791	793aa	ENSGACP00000058275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4R3X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000077757.1	sox6-207	3335	777aa	ENSGACP00000039492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PL50	-
ENSGACT00000050617.1	sox6-203	3128	708aa	ENSGACP00000063258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4RJZ7	-
ENSGACT00000053466.1	sox6-204	3116	704aa	ENSGACP00000068271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4S1P5	-
ENSGACT00000032906.1	sox6-205	3101	699aa	ENSGACP00000058936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4R5J7	-
ENSGACT00000043542.1	sox6-206	3008	668aa	ENSGACP00000066821.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4RXG4	-
ENSGACT00000053919.1	sox6-201	2531	509aa	ENSGACP00000042375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4PU50	-
ENSGACT00000020657.2	sox6-202	1581	526aa	ENSGACP00000020618.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3PSN2	-

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Summary

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