Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rfx1a ENSGACG00000012429

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Description

regulatory factor X, 1a (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-070424-94]

Location

Primary_assembly XI: 12,380,997-12,393,527 reverse strand.

GAculeatus_UGA_version5:CM029292.1

About this gene

This gene has 5 transcripts (splice variants), 190 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000083142.1	rfx1a-205	4256	1010aa	ENSGACP00000064178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4RMM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000082242.1	rfx1a-204	4138	980aa	ENSGACP00000044767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4Q1U0	-
ENSGACT00000081442.1	rfx1a-203	3916	913aa	ENSGACP00000058980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4R7H3	-
ENSGACT00000025149.2	rfx1a-202	2872	890aa	ENSGACP00000025100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3Q5E4	-
ENSGACT00000016466.2	rfx1a-201	2412	803aa	ENSGACP00000016434.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3PFR0	-

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Summary

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