Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CXCL12 ENSGACG00000006921

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Description

chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]

Location

Primary_assembly VI: 9,691,469-9,696,717 forward strand.

GAculeatus_UGA_version5:CM029287.1

About this gene

This gene has 4 transcripts (splice variants), 183 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGACT00000009205.2	CXCL12-202	508	102aa	ENSGACP00000009185.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3NV16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSGACT00000043414.1	CXCL12-203	1443	90aa	ENSGACP00000051495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAQ4QJR9	-
ENSGACT00000009213.2	CXCL12-204	1375	98aa	ENSGACP00000009193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3NV24	-
ENSGACT00000009199.2	CXCL12-201	499	99aa	ENSGACP00000009179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3NV10	-

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Summary

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