Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Gene: LNCDAT ENSG00000288638

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Description

lncRNA divergent activator of TBXT [Source:HGNC Symbol;Acc:HGNC:54855]

Gene Synonyms

YYLNCT

Location

Chromosome 6: 166,167,920-166,171,376 forward strand.

GRCh38:CM000668.2

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000676186.1	LNCDAT-207	1967	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000674611.1	LNCDAT-201	3159	No protein	-	lncRNA		-	-
ENST00000675446.1	LNCDAT-204	3061	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000675788.1	LNCDAT-205	1661	No protein	-	lncRNA		-	-
ENST00000675188.1	LNCDAT-203	1440	No protein	-	lncRNA		-	-
ENST00000675059.1	LNCDAT-202	1339	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000675895.1	LNCDAT-206	568	No protein	-	lncRNA		-	-

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Summary

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