Gene: ABCB11 ENSG00000276582

Description

ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]

Gene Synonyms

ABC16, BSEP, PFIC-2, PFIC2, PGY4, SPGP

Location

Scaffold HSCHR2_1_CTG7_2: 109,565-123,060 reverse strand.

GRCh38:GL383522.1

View this gene on the primary assembly.

About this gene

This gene has 2 transcripts (splice variants), 1 gene allele and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000618180.1	ABCB11-211	2040	451aa	ENSP00000480206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q53S60	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000611248.1	ABCB11-210	1523	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Gene: ABCB11 ENSG00000276582

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Gene: ABCB11 ENSG00000276582

Summary

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