Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSG00000272622

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Description

novel transcript

Location

Chromosome 2: 226,794,675-226,813,741 forward strand.

GRCh38:CM000664.2

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000727652.1	-	2149	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000668519.2	-	3475	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000727653.1	-	2686	No protein	-	lncRNA		-	-
ENST00000607970.3	-	1822	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000727658.1	-	1256	No protein	-	lncRNA		-	-
ENST00000727663.1	-	1017	No protein	-	lncRNA		-	-
ENST00000727661.1	-	1013	No protein	-	lncRNA		-	-
ENST00000727666.1	-	970	No protein	-	lncRNA		-	-
ENST00000727667.1	-	894	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000727664.1	-	879	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000727665.1	-	852	No protein	-	lncRNA		-	-
ENST00000727655.1	-	811	No protein	-	lncRNA		-	-
ENST00000727660.1	-	774	No protein	-	lncRNA		-	-
ENST00000727659.1	-	757	No protein	-	lncRNA		-	-
ENST00000727657.1	-	728	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000727654.1	-	685	No protein	-	lncRNA		-	-
ENST00000727656.1	-	665	No protein	-	lncRNA		-	-
ENST00000727668.1	-	620	No protein	-	lncRNA		-	-
ENST00000727662.1	-	591	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

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Summary

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