Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC02343 ENSG00000271850

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Description

long intergenic non-protein coding RNA 2343 [Source:HGNC Symbol;Acc:HGNC:53263]

Location

Chromosome 13: 34,347,864-34,625,428 forward strand.

GRCh38:CM000675.2

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000791005.1	LINC02343-203	473	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664334.1	LINC02343-202	2532	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791009.1	LINC02343-207	1020	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791020.1	LINC02343-218	1020	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791011.1	LINC02343-209	1019	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791010.1	LINC02343-208	955	No protein	-	lncRNA		-	-
ENST00000791013.1	LINC02343-211	931	No protein	-	lncRNA		-	-
ENST00000791019.1	LINC02343-217	895	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791008.1	LINC02343-206	881	No protein	-	lncRNA		-	-
ENST00000791012.1	LINC02343-210	875	No protein	-	lncRNA		-	-
ENST00000791016.1	LINC02343-214	720	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791015.1	LINC02343-213	647	No protein	-	lncRNA		-	-
ENST00000605909.1	LINC02343-201	573	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000791018.1	LINC02343-216	532	No protein	-	lncRNA		-	-
ENST00000791017.1	LINC02343-215	511	No protein	-	lncRNA		-	-
ENST00000791007.1	LINC02343-205	489	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000791006.1	LINC02343-204	416	No protein	-	lncRNA		-	-
ENST00000791014.1	LINC02343-212	416	No protein	-	lncRNA		-	-

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Summary

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