Gene: ATP2B1-AS1 ENSG00000271614

Description

ATP2B1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27883]

Gene Synonyms

LINC00936

Location

Chromosome 12: 89,708,177-90,143,524 forward strand.

GRCh38:CM000674.2

About this gene

This gene has 50 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000651272.1	ATP2B1-AS1-203	675	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716128.1	ATP2B1-AS1-205	3647	No protein	-	lncRNA	-	-
ENST00000820498.1	ATP2B1-AS1-235	1407	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549551.2	ATP2B1-AS1-202	1368	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000820508.1	ATP2B1-AS1-245	1360	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716131.1	ATP2B1-AS1-208	1356	No protein	-	lncRNA	-	-
ENST00000820486.1	ATP2B1-AS1-223	1348	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820485.1	ATP2B1-AS1-222	1340	No protein	-	lncRNA	-	-
ENST00000716130.1	ATP2B1-AS1-207	1312	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716135.1	ATP2B1-AS1-212	1279	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000716137.1	ATP2B1-AS1-214	1211	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000739866.1	ATP2B1-AS1-218	1175	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000652964.2	ATP2B1-AS1-204	1172	No protein	-	lncRNA	-	-
ENST00000820495.1	ATP2B1-AS1-232	1108	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820497.1	ATP2B1-AS1-234	984	No protein	-	lncRNA	-	-
ENST00000820484.1	ATP2B1-AS1-221	949	No protein	-	lncRNA	-	-
ENST00000820499.1	ATP2B1-AS1-236	923	No protein	-	lncRNA	-	-
ENST00000820493.1	ATP2B1-AS1-230	885	No protein	-	lncRNA	-	-
ENST00000820487.1	ATP2B1-AS1-224	881	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000739864.1	ATP2B1-AS1-216	876	No protein	-	lncRNA	-	-
ENST00000739867.1	ATP2B1-AS1-219	865	No protein	-	lncRNA	-	-
ENST00000716138.1	ATP2B1-AS1-215	861	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820489.1	ATP2B1-AS1-226	833	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820490.1	ATP2B1-AS1-227	823	No protein	-	lncRNA	-	-
ENST00000820492.1	ATP2B1-AS1-229	819	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820491.1	ATP2B1-AS1-228	810	No protein	-	lncRNA	-	-
ENST00000820500.1	ATP2B1-AS1-237	776	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820488.1	ATP2B1-AS1-225	771	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820506.1	ATP2B1-AS1-243	768	No protein	-	lncRNA	-	-
ENST00000820494.1	ATP2B1-AS1-231	757	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820505.1	ATP2B1-AS1-242	756	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820483.1	ATP2B1-AS1-220	734	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820496.1	ATP2B1-AS1-233	733	No protein	-	lncRNA	-	-
ENST00000716136.1	ATP2B1-AS1-213	726	No protein	-	lncRNA	-	-
ENST00000820501.1	ATP2B1-AS1-238	726	No protein	-	lncRNA	-	-
ENST00000820512.1	ATP2B1-AS1-249	726	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000820504.1	ATP2B1-AS1-241	668	No protein	-	lncRNA	-	-
ENST00000820507.1	ATP2B1-AS1-244	654	No protein	-	lncRNA	-	-
ENST00000820509.1	ATP2B1-AS1-246	628	No protein	-	lncRNA	-	-
ENST00000716129.1	ATP2B1-AS1-206	620	No protein	-	lncRNA	-	-
ENST00000820503.1	ATP2B1-AS1-240	616	No protein	-	lncRNA	-	-
ENST00000716133.1	ATP2B1-AS1-210	615	No protein	-	lncRNA	-	-
ENST00000820513.1	ATP2B1-AS1-250	592	No protein	-	lncRNA	-	-
ENST00000547370.5	ATP2B1-AS1-201	547	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000716134.1	ATP2B1-AS1-211	529	No protein	-	lncRNA	-	-
ENST00000820502.1	ATP2B1-AS1-239	499	No protein	-	lncRNA	-	-
ENST00000820511.1	ATP2B1-AS1-248	439	No protein	-	lncRNA	-	-
ENST00000716132.1	ATP2B1-AS1-209	428	No protein	-	lncRNA	-	-
ENST00000739865.1	ATP2B1-AS1-217	358	No protein	-	lncRNA	-	-
ENST00000820510.1	ATP2B1-AS1-247	235	No protein	-	lncRNA	-	-

Gene: ATP2B1-AS1 ENSG00000271614

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Gene: ATP2B1-AS1 ENSG00000271614

Summary

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