Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF350-AS1 ENSG00000269235

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Description

ZNF350 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48598]

Gene Synonyms

HCCAT3, UC002PYC

Location

Chromosome 19: 51,949,112-51,981,374 forward strand.

GRCh38:CM000681.2

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000595010.5	ZNF350-AS1-201	755	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000658402.1	ZNF350-AS1-203	4562	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661211.1	ZNF350-AS1-204	2645	No protein	-	lncRNA		-	-
ENST00000797557.1	ZNF350-AS1-210	767	No protein	-	lncRNA		-	-
ENST00000797555.1	ZNF350-AS1-208	763	No protein	-	lncRNA		-	-
ENST00000797554.1	ZNF350-AS1-207	748	No protein	-	lncRNA		-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000797558.1	ZNF350-AS1-211	678	No protein	-	lncRNA		-	-
ENST00000600253.1	ZNF350-AS1-202	577	No protein	-	lncRNA		-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000797553.1	ZNF350-AS1-206	555	No protein	-	lncRNA		-	-
ENST00000797559.1	ZNF350-AS1-212	497	No protein	-	lncRNA		-	-
ENST00000692818.2	ZNF350-AS1-205	480	No protein	-	lncRNA		-	-
ENST00000797560.1	ZNF350-AS1-213	411	No protein	-	lncRNA		-	-
ENST00000797556.1	ZNF350-AS1-209	322	No protein	-	lncRNA		-	-

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Summary

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